Phenotype IDPhenotype NameScoringvariation type#Samples
AT_P_32avrPphBFollowing inoculation of two leaves per plant with 0.1 ml of 10 -8 cfu/ml bacteria in 10 mM MgSO4 buffer using a blunt-tipped syringe, leaf collapse was scored at 20 hrs and again at 24 hrs after inoculation. A positive score at either time point was deemed a hypersensitive responsebinary90
AT_P_35avrBFollowing inoculation of two leaves per plant with 0.1 ml of 10 -8 cfu/ml bacteria in 10 mM MgSO4 buffer using a blunt-tipped syringe, leaf collapse was scored at 20 hrs and again at 24 hrs after inoculation. A positive score at either time point was deemed a hypersensitive responsebinary87
AT_P_182Hypocotyl lengthAfter seven days growth under the photocycle and thermocycle treatment,plants were flattened directly on the agar and imaged on a flatbed scanner. Hypocotyl lengths were determined using NIH Imagecontinuous89
AT_P_12Hiks1All interactions were scored specifically on first true leaves as compatible, incompatible or intermediate depending on the consistency of presence / absence of sporangiophores determined on 5-10 seedlings of each genotype with three independent replicationsbinary84
AT_P_278Germ in darkThe ability to germinate in the dark at 4°C was measured as the percentage of non dormant seeds that can germinate during 1-week long cold exposure, in the absence of lightcontinuous93
AT_P_163Germ 22Days to germination of each accession were recorded daily at each temperature upon first emergence of cotyledonscategorical177
AT_P_162Germ 16Days to germination of each accession were recorded daily at each temperature upon first emergence of cotyledonscategorical176
AT_P_161Germ 10Days to germination of each accession were recorded daily at each temperature upon first emergence of cotyledonscategorical177
AT_P_75FWLesioning measured by fresh weightcontinuous95
AT_P_59FT GHFlowering time was scored as the number of days between germination date and appearance of the first flowercontinuous166
AT_P_57FT FieldFlowering time was scored as the number of days between germination date and appearance of the first flowercontinuous180
AT_P_60FT Duration GHNumber of days between appearance of the first flower and the senescence of the last flowercontinuous147
AT_P_58FT Diameter FieldLongest diameter of the plant measured on the day the first flower was observedcontinuous180
AT_P_7FT22Plants were checked bi-weekly for presence of first buds, and the average flowering time of 4 plants of the same accession were collectedcontinuous193
AT_P_6FT16Plants were checked bi-weekly for presence of first buds, and the average flowering time of 4 plants of the same accession were collectedcontinuous193
AT_P_5FT10Plants were checked bi-weekly for presence of first buds, and the average flowering time of 4 plants of the same accession were collectedcontinuous194
AT_P_44FRIRNA was extracted from leaves after 4 wks of growth. FRI gene expression levels were determined by Northern hybridization quantified relative to $Beta;-TUBULIN expressioncontinuous164
AT_P_43FLCRNA was extracted from leaves after 4 wks of growth. FLC gene expression levels were determined by Northern hybridization quantified relative to $Beta;-TUBULIN expressioncontinuous167
AT_P_23Fe56Iron concentrations in leaves, grown in soil. Elemental analysis was performed with an ICP-MS (PerkinElmer). Sample normalized to calculated weights as described in Baxter et al., 2008continuous93
AT_P_10Emwa1All interactions were scored specifically on first true leaves as compatible, incompatible or intermediate depending on the consistency of presence / absence of sporangiophores determined on 5-10 seedlings of each genotype with three independent replicationsbinary85
AT_P_11Emoy*All interactions were scored specifically on first true leaves as compatible, incompatible or intermediate depending on the consistency of presence / absence of sporangiophores determined on 5-10 seedlings of each genotype with three independent replicationsbinary76
AT_P_9Emco5All interactions were scored specifically on first true leaves as compatible, incompatible or intermediate depending on the consistency of presence / absence of sporangiophores determined on 5-10 seedlings of each genotype with three independent replicationsbinary86
AT_P_76DWLesioning measured by dry weightcontinuous95
AT_P_279DSDS50Number of days of seed dry storage required to reach 50% germination, or DSDS50 value (Alonso-Blanco et al., 2003)continuous109
AT_P_26Cu65Copper concentrations in leaves, grown in soil. Elemental analysis was performed with an ICP-MS (PerkinElmer). Sample normalized to calculated weights as described in Baxter et al., 2008continuous93